Transcript: lnc-NDUFS6-4:3

Basic information

LNCipedia transcript ID: lnc-NDUFS6-4:3 
LNCipedia gene ID: lnc-NDUFS6-4
RefSeq ID: NR_109912
Location (hg19): chr5:1887445-1900607
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1636 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109912.1
Alternative gene names: CTD-2194D22.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.0919 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDUFS6-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CARD6-362:2
5.1 lnc-CARD6-362:2
5.2 lnc-NDUFS6-4:3