Transcript: lnc-NEDD8-MDP1-1:17

Basic information

LNCipedia transcript ID: lnc-NEDD8-MDP1-1:17 
LNCipedia gene ID: lnc-NEDD8-MDP1-1
Location (hg19): chr14:24679871-24681315
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 716 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT036012
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.4032 non-coding 
CPAT coding probability 9.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEDD8-MDP1-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHMP4A-1:17
4.0 lnc-NEDD8-MDP1-1:17
4.1 lnc-NEDD8-MDP1-1:17
5.0 lnc-NEDD8-MDP1-1:17
5.1 lnc-EFS-43:17
5.2 lnc-NEDD8-MDP1-1:17