Transcript: lnc-NEDD9-3:1

Basic information

LNCipedia transcript ID: lnc-NEDD9-3:1 
LNCipedia gene ID: lnc-NEDD9-3
Location (hg19): chr6:11713908-11736947
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1923 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT107762
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.4688 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEDD9-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEDD9-2:1
4.0 lnc-NEDD9-3:1
4.1 lnc-NEDD9-3:1
5.0 lnc-NEDD9-3:1
5.1 lnc-ECI2-247:1
5.2 lnc-NEDD9-3:1