Transcript: lnc-NEFM-3:1

Basic information

LNCipedia transcript ID: lnc-NEFM-3:1 
LNCipedia gene ID: lnc-NEFM-3
Location (hg19): chr8:24868912-24870541
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1630 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_H22722_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4644 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEFM-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEFM-3:1
4.0 lnc-NEFM-3:1
4.1 lnc-NEFM-3:1
5.0 lnc-NEFM-3:1
5.1 lnc-RHOBTB2-60:1
5.2 lnc-NEFM-3:1