Transcript: lnc-NEIL3-2:3

Basic information

LNCipedia transcript ID: lnc-NEIL3-2:3 
LNCipedia gene ID: lnc-NEIL3-2
Location (hg19): chr4:179057815-179062306
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 569 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008352; NONHSAT099399
Alternative gene names: XLOC_003798; linc-ODZ3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 53.7214 non-coding 
CPAT coding probability 19.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NEIL3-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-389E17.1.1-2:1
3.1 lnc-RP11-389E17.1.1-2:1
4.0 lnc-RP11-389E17.1.1-2:1
4.1 lnc-RP11-389E17.1.1-2:1
5.0 lnc-RP11-389E17.1.1-2:1
5.1 lnc-GALNTL6-52:1
5.2 lnc-NEIL3-2:3