Transcript: lnc-NEK5-1:3

Basic information

LNCipedia transcript ID: lnc-NEK5-1:3 
LNCipedia gene ID: lnc-NEK5-1
Location (hg19): chr13:52603159-52624034
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1284 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_852_chr13:52603158-52624034_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.3436 non-coding 
CPAT coding probability 22.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEK5-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP7B-1:1
4.0 lnc-NEK5-1:3
4.1 lnc-NEK5-1:3
5.0 lnc-NEK5-1:3
5.1 lnc-CCDC169-186:1
5.2 lnc-NEK5-1:3