Transcript: lnc-NEK5-2:1

Basic information

LNCipedia transcript ID: lnc-NEK5-2:1 
LNCipedia gene ID: lnc-NEK5-2
Location (hg19): chr13:52571541-52583296
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 754 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_851_chr13:52571540-52583296_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.1684 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEK5-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEK5-2:1
4.0 lnc-NEK5-2:1
4.1 lnc-NEK5-2:1
5.0 lnc-NEK5-2:1
5.1 lnc-CCDC169-185:1
5.2 lnc-NEK5-2:1