Transcript: lnc-NEMP2-1:2

Basic information

LNCipedia transcript ID: lnc-NEMP2-1:2 
LNCipedia gene ID: lnc-NEMP2-1
Ensembl Gene ID: ENSG00000228509
Ensembl Transcript ID: ENST00000428032
Location (hg19): chr2:191542023-191566272
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 456 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000428032.1; AC006460.2-001; OTTHUMT00000335623.1; NONHSAT076098
Alternative gene names: ENSG00000228509.1; AC006460.2; OTTHUMG00000154512.1; ENSG00000228509.5; AC006460.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -201.5107 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEMP2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM194B-1:2
4.0 lnc-TMEM194B-1:2
4.1 lnc-TMEM194B-1:2
5.0 lnc-TMEM194B-1:2
5.1 lnc-CALCRL-41:2
5.2 lnc-NEMP2-1:2