Transcript: lnc-NETO1-1:6

Basic information

LNCipedia transcript ID: lnc-NETO1-1:6 
LNCipedia gene ID: lnc-NETO1-1
Location (hg19): chr18:70818635-70931694
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1063 bp
Exons: 8
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026730; NONHSAT059826
Alternative gene names: XLOC_012877; linc-NETO1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.4478 non-coding 
CPAT coding probability 8.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NETO1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NETO1-1:5
3.1 lnc-NETO1-1:6
4.0 lnc-NETO1-1:6
4.1 lnc-NETO1-1:6
5.0 lnc-NETO1-1:6
5.1 lnc-PQLC1-63:12
5.2 lnc-NETO1-1:6