Transcript: lnc-NEURL1B-3:11

Basic information

LNCipedia transcript ID: lnc-NEURL1B-3:11 
LNCipedia gene ID: lnc-NEURL1B-3
Location (hg19): chr5:171919656-171935321
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 833 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010168; NONHSAT105120
Alternative gene names: XLOC_004631; linc-NEURL1B-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.8234 non-coding 
CPAT coding probability 4.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEURL1B-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NEURL1B-3:2
3.1 lnc-NEURL1B-4:2
4.0 lnc-NEURL1B-4:2
4.1 lnc-NEURL1B-3:11
5.0 lnc-NEURL1B-3:11
5.1 lnc-ATP6V0E1-23:8
5.2 lnc-NEURL1B-3:11