Transcript: lnc-NEURL1B-3:3

Basic information

LNCipedia transcript ID: lnc-NEURL1B-3:3 
LNCipedia gene ID: lnc-NEURL1B-3
Location (hg19): chr5:171960624-171962758
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 284 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT105121; FPKM1_group_26759_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -291.7139 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEURL1B-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEURL1B-3:3
4.0 lnc-NEURL1B-3:3
4.1 lnc-NEURL1B-3:3
5.0 lnc-NEURL1B-3:3
5.1 lnc-ATP6V0E1-23:9
5.2 lnc-NEURL1B-3:3