Transcript: lnc-NFE2L1-4:1

Basic information

LNCipedia transcript ID: lnc-NFE2L1-4:1 
LNCipedia gene ID: lnc-NFE2L1-4
Location (hg19): chr17:46185087-46185297
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 211 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr17_8088_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -519.8764 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NFE2L1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNX11-4:3
4.0 lnc-SNX11-4:3
4.1 lnc-SNX11-4:3
5.0 lnc-SNX11-4:3
5.1 lnc-ACSF2-69:3
5.2 lnc-NFE2L1-4:1