Transcript: lnc-NFKBIZ-5:3

Basic information

LNCipedia transcript ID: lnc-NFKBIZ-5:3 
LNCipedia gene ID: lnc-NFKBIZ-5
RefSeq ID: NR_135549
Location (hg19): chr3:101882549-101883715
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 469 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135549.1
Alternative gene names: LOC101929411


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -151.7263 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NFKBIZ-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TMEM45A-21:1
5.1 lnc-TMEM45A-21:1
5.2 lnc-NFKBIZ-5:3