Transcript: lnc-NGFR-3:14

Basic information

LNCipedia transcript ID: lnc-NGFR-3:14 
LNCipedia gene ID: lnc-NGFR-3
Location (hg19): chr17:47438543-47462138
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 11725 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248714.2|MICT00000150063.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.0679 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NGFR-3:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NGFR-3:14
5.0 lnc-NGFR-3:14
5.1 lnc-ACSF2-35:10
5.2 lnc-NGFR-3:14