Transcript: lnc-NIFK-5:1

Basic information

LNCipedia transcript ID: lnc-NIFK-5:1 
LNCipedia gene ID: lnc-NIFK-5
Location (hg19): chr2:124597399-124671069
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 329 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004434; NONHSAT074104
Alternative gene names: XLOC_002305; linc-MKI67IP-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.4827 non-coding 
CPAT coding probability 3.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NIFK-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MKI67IP-5:1
3.1 lnc-MKI67IP-5:1
4.0 lnc-MKI67IP-5:1
4.1 lnc-MKI67IP-5:1
5.0 lnc-MKI67IP-5:1
5.1 lnc-IWS1-34:1
5.2 lnc-NIFK-5:1