Transcript: lnc-NIPAL2-2:1

Basic information

LNCipedia transcript ID: lnc-NIPAL2-2:1 
LNCipedia gene ID: lnc-NIPAL2-2
Location (hg19): chr8:99425110-99426012
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 587 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT127924
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.2868 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NIPAL2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NIPAL2-2:1
4.0 lnc-NIPAL2-2:1
4.1 lnc-NIPAL2-2:1
5.0 lnc-NIPAL2-2:1
5.1 lnc-ZNF706-87:1
5.2 lnc-NIPAL2-2:1