Transcript: lnc-NMS-3:1

Basic information

LNCipedia transcript ID: lnc-NMS-3:1 
LNCipedia gene ID: lnc-NMS-3
Location (hg19): chr2:101134674-101137083
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1124 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1897_chr2:101134673-101137083_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.5113 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NMS-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NMS-3:1
4.0 lnc-NMS-3:1
4.1 lnc-NMS-3:1
5.0 lnc-NMS-3:1
5.1 lnc-SLC9A4-50:1
5.2 lnc-NMS-3:1