Transcript: lnc-NOC4L-4:13

Basic information

LNCipedia transcript ID: lnc-NOC4L-4:13 
LNCipedia gene ID: lnc-NOC4L-4
Ensembl Gene ID: ENSG00000256943
Ensembl Transcript ID: ENST00000376617
Location (hg19): chr12:132852030-132854915
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1766 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000376617.3; RP13-895J2.2-002; OTTHUMT00000397298.2; NONHSAT032076
Alternative gene names: ENSG00000256943.1; RP13-895J2.2; OTTHUMG00000167981.1; AC148477.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.8155 non-coding 
CPAT coding probability 53.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NOC4L-4:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBRSL1-4:2
4.0 lnc-FBRSL1-4:2
4.1 lnc-FBRSL1-4:2
5.0 lnc-FBRSL1-4:2
5.1 lnc-NOC4L-5:9
5.2 lnc-NOC4L-4:13