Transcript: lnc-NOCT-17:2

Basic information

LNCipedia transcript ID: lnc-NOCT-17:2 
LNCipedia gene ID: lnc-NOCT-17
Location (hg19): chr4:138334360-138338970
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1575 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003ihd_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.6034 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOCT-17:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCRN4L-17:1
4.0 lnc-CCRN4L-17:1
4.1 lnc-CCRN4L-17:1
5.0 lnc-CCRN4L-17:1
5.1 lnc-NOCT-17:1
5.2 lnc-NOCT-17:2