Transcript: lnc-NOCT-18:2

Basic information

LNCipedia transcript ID: lnc-NOCT-18:2 
LNCipedia gene ID: lnc-NOCT-18
Location (hg19): chr4:139326751-139329031
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2281 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000070309.1|ENCT00000324350.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.6093 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOCT-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCRN4L-18:1
5.0 lnc-CCRN4L-18:1
5.1 lnc-NOCT-18:1
5.2 lnc-NOCT-18:2