Transcript: lnc-NOCT-5:2

Basic information

LNCipedia transcript ID: lnc-NOCT-5:2 
LNCipedia gene ID: lnc-NOCT-5
Location (hg19): chr4:138864150-138874368
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1691 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT098407; FPKM1_group_24170_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3339 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOCT-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCRN4L-5:4
4.0 lnc-CCRN4L-5:4
4.1 lnc-CCRN4L-5:4
5.0 lnc-CCRN4L-5:4
5.1 lnc-NOCT-4:1
5.2 lnc-NOCT-5:2