Transcript: lnc-NOX3-4:1

Basic information

LNCipedia transcript ID: lnc-NOX3-4:1 
LNCipedia gene ID: lnc-NOX3-4
Location (hg19): chr6:156693389-156695660
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 825 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012340; NONHSAT115688
Alternative gene names: XLOC_005890; linc-NOX3-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.692 non-coding 
CPAT coding probability 9.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOX3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NOX3-4:1
3.1 lnc-NOX3-4:1
4.0 lnc-NOX3-4:1
4.1 lnc-NOX3-4:1
5.0 lnc-NOX3-4:1
5.1 lnc-DYNLT1-30:6
5.2 lnc-NOX3-4:1

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