Transcript: lnc-NPAP1-8:3

Basic information

LNCipedia transcript ID: lnc-NPAP1-8:3 
LNCipedia gene ID: lnc-NPAP1-8
Location (hg19): chr15:24545218-24571710
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1606 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023866; NONHSAT040893
Alternative gene names: XLOC_011176; linc-C15orf2-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.7761 non-coding 
CPAT coding probability 11.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPAP1-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C15orf2-7:1
3.1 lnc-C15orf2-8:3
4.0 lnc-C15orf2-8:3
4.1 lnc-C15orf2-8:3
5.0 lnc-C15orf2-8:3
5.1 lnc-SNRPN-15:3
5.2 lnc-NPAP1-8:3