Transcript: lnc-NPHS2-2:1

Basic information

LNCipedia transcript ID: lnc-NPHS2-2:1 
LNCipedia gene ID: lnc-NPHS2-2
Location (hg19): chr1:179555798-179559942
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1544 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT007869
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.7062 non-coding 
CPAT coding probability 83.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NPHS2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NPHS2-2:1
4.0 lnc-NPHS2-2:1
4.1 lnc-NPHS2-2:1
5.0 lnc-NPHS2-2:1
5.1 lnc-SH2D1B-177:1
5.2 lnc-NPHS2-2:1