Transcript: lnc-NPIPA7-12:1

Basic information

LNCipedia transcript ID: lnc-NPIPA7-12:1 
LNCipedia gene ID: lnc-NPIPA7-12
Location (hg19): chr16:17180365-17182710
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2346 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT140807; FPKM1_group_11403_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.6714 non-coding 
CPAT coding probability 2.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPIPA7-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-467M13.1.1-12:1
4.0 lnc-RP11-467M13.1.1-12:1
4.1 lnc-RP11-467M13.1.1-12:1
5.0 lnc-RP11-467M13.1.1-12:1
5.1 lnc-MPV17L-31:1
5.2 lnc-NPIPA7-12:1