Transcript: lnc-NPIPB13-4:1

Basic information

LNCipedia transcript ID: lnc-NPIPB13-4:1 
LNCipedia gene ID: lnc-NPIPB13-4
Location (hg19): chr16:30309700-30312572
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 303 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT141733
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
EFIQQPENK 92.3076923076923% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.5451 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NPIPB13-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-347C12.1.1-1:3
4.0 lnc-RP11-347C12.1.1-1:3
4.1 lnc-RP11-347C12.1.1-1:3
5.0 lnc-RP11-347C12.1.1-1:3
5.1 lnc-SULT1A2-76:1
5.2 lnc-NPIPB13-4:1