Transcript: lnc-NPY5R-10:1

Basic information

LNCipedia transcript ID: lnc-NPY5R-10:1 
LNCipedia gene ID: lnc-NPY5R-10
Location (hg19): chr4:164088135-164091583
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3449 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000070845.1|ENCT00000325955.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.2729 non-coding 
CPAT coding probability 2.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPY5R-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NPY5R-10:1
5.0 lnc-NPY5R-10:1
5.1 lnc-TMEM144-28:1
5.2 lnc-NPY5R-10:1