Transcript: lnc-NPY5R-2:2

Basic information

LNCipedia transcript ID: lnc-NPY5R-2:2 
LNCipedia gene ID: lnc-NPY5R-2
Location (hg19): chr4:163662733-163813536
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 280 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008309; NONHSAT099044
Alternative gene names: XLOC_003764; linc-NPY5R-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.2271 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPY5R-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NPY5R-2:2
3.1 lnc-NPY5R-2:2
4.0 lnc-NPY5R-2:2
4.1 lnc-NPY5R-2:2
5.0 lnc-NPY5R-2:2
5.1 lnc-TMEM144-25:3
5.2 lnc-NPY5R-2:2