Transcript: lnc-NR1D1-1:6

Basic information

LNCipedia transcript ID: lnc-NR1D1-1:6 
LNCipedia gene ID: lnc-NR1D1-1
Location (hg19): chr17:38269490-38278161
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 8672 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033617.1|HBMT00000626813.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 68.1207 coding 
CPAT coding probability 12.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NR1D1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NR1D1-1:6
5.0 lnc-NR1D1-1:6
5.1 lnc-NR1D1-1:6
5.2 lnc-NR1D1-1:6