Transcript: lnc-NR2F6-4:2

Basic information

LNCipedia transcript ID: lnc-NR2F6-4:2 
LNCipedia gene ID: lnc-NR2F6-4
Ensembl Gene ID: ENSG00000268056
Ensembl Transcript ID: ENST00000597216
Location (hg19): chr19:17263398-17278857
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 395 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT062835; ENST00000597216.1; ENST00000597216.5
Alternative gene names: ENSG00000268056.1; CTD-3032J10.2; ENSG00000268056.5; AC020913.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 62.4196 coding 
CPAT coding probability 50.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NR2F6-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NR2F6-4:2
4.0 lnc-NR2F6-4:2
4.1 lnc-NR2F6-4:2
5.0 lnc-NR2F6-4:2
5.1 lnc-PALM3-92:2
5.2 lnc-NR2F6-4:2