Transcript: lnc-NRDE2-5:1

Basic information

LNCipedia transcript ID: lnc-NRDE2-5:1 
LNCipedia gene ID: lnc-NRDE2-5
Location (hg19): chr14:90862249-90863216
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 968 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000021833.1|ENCT00000136601.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -199.4615 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NRDE2-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C14orf102-5:1
5.0 lnc-C14orf102-5:1
5.1 lnc-GALC-33:1
5.2 lnc-NRDE2-5:1