Transcript: lnc-NREP-7:1

Basic information

LNCipedia transcript ID: lnc-NREP-7:1 
LNCipedia gene ID: lnc-NREP-7
Location (hg19): chr5:111176253-111445080
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 375 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000080892.1|MICT00000287321.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -264.1403 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NREP-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C5orf13-7:1
5.0 lnc-C5orf13-7:1
5.1 lnc-LOX-131:1
5.2 lnc-NREP-7:1