Transcript: lnc-NRG4-4:1

Basic information

LNCipedia transcript ID: lnc-NRG4-4:1 
LNCipedia gene ID: lnc-NRG4-4
RefSeq ID: NR_003136
Location (hg19): chr15:76225024-76225471
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 448 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT047386; NR_003136; NR_003136.1
Alternative gene names: HsT18082; NCRNA00053; FISTC1OS; FBXO22-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -538.6743 non-coding 
CPAT coding probability 12.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NRG4-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRG4-2:1
4.0 FBXO22-AS1:1
4.1 FBXO22-AS1:1
5.0 FBXO22-AS1:1
5.1 lnc-PEAK1-24:1
5.2 lnc-NRG4-4:1