Transcript: lnc-NSD3-12:2

Basic information

LNCipedia transcript ID: lnc-NSD3-12:2 
LNCipedia gene ID: lnc-NSD3-12
Location (hg19): chr8:38291905-38292261
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 357 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT147627
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.0986 non-coding 
CPAT coding probability 26.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NSD3-12:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WHSC1L1-12:2
4.0 lnc-WHSC1L1-12:2
4.1 lnc-WHSC1L1-12:2
5.0 lnc-WHSC1L1-12:2
5.1 lnc-C8orf86-12:2
5.2 lnc-NSD3-12:2