Transcript: lnc-NT5DC1-1:3

Basic information

LNCipedia transcript ID: lnc-NT5DC1-1:3 
LNCipedia gene ID: lnc-NT5DC1-1
Location (hg19): chr6:116575385-116579638
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 314 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237021.2|FTMT22300005886.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -57.9483 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NT5DC1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NT5DC1-1:3
5.0 lnc-NT5DC1-1:3
5.1 lnc-NT5DC1-1:3
5.2 lnc-NT5DC1-1:3