Transcript: lnc-NUCB2-11:1

Basic information

LNCipedia transcript ID: lnc-NUCB2-11:1 
LNCipedia gene ID: lnc-NUCB2-11
Location (hg19): chr11:17099397-17108118
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8722 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000001650.1|ENCT00000064712.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 35.2818 non-coding 
CPAT coding probability 2.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUCB2-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NUCB2-11:1
5.0 lnc-NUCB2-11:1
5.1 lnc-NUCB2-11:1
5.2 lnc-NUCB2-11:1