Transcript: lnc-NUDCD2-2:15

Basic information

LNCipedia transcript ID: lnc-NUDCD2-2:15 
LNCipedia gene ID: lnc-NUDCD2-2
Ensembl Gene ID: ENSG00000254186
Ensembl Transcript ID: ENST00000646143
Location (hg19): chr5:161851048-161978264
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3653 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646143.1
Alternative gene names: ENSG00000254186.2; AC113414.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.6665 non-coding 
CPAT coding probability 43.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NUDCD2-2:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FAM71B-44:15
5.1 lnc-FAM71B-44:15
5.2 lnc-NUDCD2-2:15