Transcript: lnc-NUMB-3:2

Basic information

LNCipedia transcript ID: lnc-NUMB-3:2 
LNCipedia gene ID: lnc-NUMB-3
Location (hg19): chr14:73710726-73712687
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1683 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000554614.1; RP4-647C14.2-001; OTTHUMT00000413383.1; NONHSAT037688
Alternative gene names: ENSG00000258376.1; RP4-647C14.2; OTTHUMG00000171434.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.5747 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUMB-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUMB-3:2
4.0 lnc-NUMB-3:2
4.1 lnc-NUMB-3:2
5.0 lnc-NUMB-3:2
5.1 lnc-ABCD4-26:3
5.2 lnc-NUMB-3:2