Transcript: lnc-NXPH1-2:18

Basic information

LNCipedia transcript ID: lnc-NXPH1-2:18 
LNCipedia gene ID: lnc-NXPH1-2
Location (hg19): chr7:8301845-8438388
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 15648 bp
Exons: 8
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229970.3|MICT00000318501.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.088 non-coding 
CPAT coding probability 6.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPH1-2:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NXPH1-2:18
5.0 lnc-NXPH1-2:18
5.1 lnc-SLC29A4-50:11
5.2 lnc-NXPH1-2:18