Transcript: lnc-NXPH1-5:2

Basic information

LNCipedia transcript ID: lnc-NXPH1-5:2 
LNCipedia gene ID: lnc-NXPH1-5
Location (hg19): chr7:9673900-9675447
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1548 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT119167; NR_002790
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.7078 non-coding 
CPAT coding probability 10.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPH1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NXPH1-5:2
4.0 lnc-NXPH1-5:2
4.1 lnc-NXPH1-5:2
5.0 lnc-NXPH1-5:2
5.1 lnc-SLC29A4-52:2
5.2 lnc-NXPH1-5:2