Transcript: lnc-NYAP2-5:4

Basic information

LNCipedia transcript ID: lnc-NYAP2-5:4 
LNCipedia gene ID: lnc-NYAP2-5
Location (hg19): chr2:227037171-227046481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2251 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000046908.1|FTMT20700031918.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.268 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NYAP2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NYAP2-5:4
5.0 lnc-NYAP2-5:4
5.1 lnc-MOGAT1-65:4
5.2 lnc-NYAP2-5:4