Transcript: lnc-OAZ1-3:2

Basic information

LNCipedia transcript ID: lnc-OAZ1-3:2 
LNCipedia gene ID: lnc-OAZ1-3
Location (hg19): chr19:2330294-2330756
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 390 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000586111.2
Alternative gene names: ENSG00000273309.1; AC004410.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.1333 non-coding 
CPAT coding probability 7.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OAZ1-3:2 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004410.1-1:13
4.0 lnc-AC004410.1-1:13
4.1 lnc-AC004410.1-1:13
5.0 lnc-AC004410.1-1:13
5.1 lnc-RPL36-97:2
5.2 lnc-OAZ1-3:2