Transcript: lnc-OCIAD2-8:5

Basic information

LNCipedia transcript ID: lnc-OCIAD2-8:5 
LNCipedia gene ID: lnc-OCIAD2-8
Location (hg19): chr4:49244704-49497113
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 606 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000072514.1|FTMT21300048047.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.1457 non-coding 
CPAT coding probability 3.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OCIAD2-8:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OCIAD2-8:5
5.0 lnc-OCIAD2-8:5
5.1 lnc-FRYL-9:3
5.2 lnc-OCIAD2-8:5