Transcript: lnc-OLR1-2:1

Basic information

LNCipedia transcript ID: lnc-OLR1-2:1 
LNCipedia gene ID: lnc-OLR1-2
Ensembl Gene ID: ENSG00000255958
Ensembl Transcript ID: ENST00000538416
Location (hg19): chr12:10366760-10367360
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 329 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000538416.1; RP11-656E20.5-001; OTTHUMT00000400106.1; NONHSAT026873
Alternative gene names: ENSG00000255958.1; RP11-656E20.5; OTTHUMG00000168529.1; AC115676.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OLR1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OLR1-2:1
4.0 lnc-OLR1-2:1
4.1 lnc-OLR1-2:1
5.0 lnc-OLR1-2:1
5.1 lnc-M6PR-34:1
5.2 lnc-OLR1-2:1