Transcript: lnc-OPCML-3:11

Basic information

LNCipedia transcript ID: lnc-OPCML-3:11 
LNCipedia gene ID: lnc-OPCML-3
Location (hg19): chr11:131741789-131781030
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6439 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000238117.1|MICT00000070652.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.131 non-coding 
CPAT coding probability 2.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OPCML-3:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C11orf39-3:7
5.0 lnc-C11orf39-3:7
5.1 lnc-OPCML-3:1
5.2 lnc-OPCML-3:11