Transcript: lnc-OPHN1-2:1

Basic information

LNCipedia transcript ID: lnc-OPHN1-2:1 
LNCipedia gene ID: lnc-OPHN1-2
Location (hg19): chrX:67652773-67653755
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 377 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT137371
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -233.77 non-coding 
CPAT coding probability 56.57% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OPHN1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OPHN1-2:1
4.0 lnc-OPHN1-2:1
4.1 lnc-OPHN1-2:1
5.0 lnc-OPHN1-2:1
5.1 lnc-ZMYM3-46:1
5.2 lnc-OPHN1-2:1