Transcript: lnc-OPRK1-3:6

Basic information

LNCipedia transcript ID: lnc-OPRK1-3:6 
LNCipedia gene ID: lnc-OPRK1-3
Location (hg19): chr8:54308012-54333730
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 936 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT126588
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.1486 non-coding 
CPAT coding probability 10.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OPRK1-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OPRK1-3:6
4.0 lnc-OPRK1-3:6
4.1 lnc-OPRK1-3:6
5.0 lnc-OPRK1-3:6
5.1 lnc-IMPAD1-57:13
5.2 lnc-OPRK1-3:6