Transcript: lnc-OPRK1-3:9

Basic information

LNCipedia transcript ID: lnc-OPRK1-3:9 
LNCipedia gene ID: lnc-OPRK1-3
Location (hg19): chr8:54335384-54436523
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 890 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237807.3|ENCT00000435108.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.6415 non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OPRK1-3:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OPRK1-3:9
5.0 lnc-OPRK1-3:9
5.1 lnc-IMPAD1-57:2
5.2 lnc-OPRK1-3:9