Transcript: lnc-OR10AD1-3:2

Basic information

LNCipedia transcript ID: lnc-OR10AD1-3:2 
LNCipedia gene ID: lnc-OR10AD1-3
Location (hg19): chr12:48672796-48677977
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 484 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020776; NONHSAT027992
Alternative gene names: XLOC_010064; linc-OR10AD1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.7673 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR10AD1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OR10AD1-1:2
3.1 lnc-ZNF641-1:2
4.0 lnc-OR10AD1-3:2
4.1 lnc-OR10AD1-3:2
5.0 lnc-OR10AD1-3:2
5.1 lnc-HDAC7-13:2
5.2 lnc-OR10AD1-3:2