Transcript: lnc-OR10H5-1:7

Basic information

LNCipedia transcript ID: lnc-OR10H5-1:7 
LNCipedia gene ID: lnc-OR10H5-1
Ensembl Gene ID: ENSG00000268673
Ensembl Transcript ID: ENST00000595525
Location (hg19): chr19:15871185-15881638
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 561 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061510; ENST00000595525.1
Alternative gene names: ENSG00000268673.3; LLNLR-249E10.1; AC004597.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.5774 non-coding 
CPAT coding probability 11.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR10H5-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR10H3-1:1
4.0 lnc-OR10H3-1:1
4.1 lnc-OR10H3-1:1
5.0 lnc-OR10H3-1:1
5.1 lnc-MAP1S-54:1
5.2 lnc-OR10H5-1:7